Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm23133-201ENSMUST00000104255 135 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm5915-201ENSMUST00000116136 454 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm11488-201ENSMUST00000117277 863 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm13137-201ENSMUST00000118035 345 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm12222-201ENSMUST00000121368 260 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm3160-201ENSMUST00000128343 607 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm6428-201ENSMUST00000161062 345 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm6647-201ENSMUST00000170514 641 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm27218-201ENSMUST00000183745 392 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm27156-201ENSMUST00000184589 754 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm2566-201ENSMUST00000201267 431 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 AC166323.1-201ENSMUST00000217756 367 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 AC154576.2-203ENSMUST00000224736 253 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Trim42Q9D2H5 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.15□□□□□ -1.27
Trim42Q9D2H5 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.15□□□□□ -1.27
Trim42Q9D2H5 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm11905-201ENSMUST00000117653 678 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm13640-201ENSMUST00000118445 264 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm5809-201ENSMUST00000121854 529 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm7973-201ENSMUST00000122107 488 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm22755-201ENSMUST00000157143 100 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Mir1968-201ENSMUST00000157429 68 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm3339-201ENSMUST00000163462 475 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm25284-201ENSMUST00000180345 141 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm27018-201ENSMUST00000181136 225 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Mir6340-201ENSMUST00000183857 119 ntBASIC7.14□□□□□ -1.27
Trim42Q9D2H5 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms