Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm20074-201ENSMUST00000208144 484 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm8804-201ENSMUST00000212292 798 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 AC192334.2-201ENSMUST00000223087 1091 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 CT010480.5-201ENSMUST00000225026 217 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm6776-201ENSMUST00000057752 900 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm25189-201ENSMUST00000083911 164 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Gm43845-201ENSMUST00000202462 1820 ntBASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim11Q99PQ2 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm42455-201ENSMUST00000199761 2736 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm45061-201ENSMUST00000204395 2095 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm15094-201ENSMUST00000118394 1131 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm8534-201ENSMUST00000118553 766 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm15233-201ENSMUST00000118747 400 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm12104-201ENSMUST00000120359 979 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm16053-201ENSMUST00000120511 188 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm14156-201ENSMUST00000121538 483 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm23897-201ENSMUST00000158110 158 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm20432-201ENSMUST00000173716 250 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm20543-201ENSMUST00000174200 726 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm27014-201ENSMUST00000182658 937 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm27507-201ENSMUST00000184199 93 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm28580-201ENSMUST00000186767 88 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm37581-201ENSMUST00000192371 988 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm37770-201ENSMUST00000192855 772 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm43350-201ENSMUST00000196382 711 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm42818-201ENSMUST00000198869 987 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm42976-201ENSMUST00000200313 222 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm29759-201ENSMUST00000205860 327 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 CT030124.1-201ENSMUST00000217130 235 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 AC116726.2-201ENSMUST00000217629 986 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Mir455-201ENSMUST00000093594 82 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms