Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scrt1Q99M85 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.34□□□□□ -1.56
Scrt1Q99M85 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Scrt1Q99M85 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Scrt1Q99M85 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm25345-201ENSMUST00000104505 133 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm8501-201ENSMUST00000117684 432 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm14220-201ENSMUST00000118114 449 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm3943-201ENSMUST00000118606 718 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm5387-201ENSMUST00000119776 857 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm13207-201ENSMUST00000119862 773 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm13537-201ENSMUST00000120467 267 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm23958-201ENSMUST00000157207 105 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm2058-201ENSMUST00000178791 560 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm28064-201ENSMUST00000185639 858 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm37358-201ENSMUST00000195492 479 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scrt1Q99M85 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.33□□□□□ -1.56
Scrt1Q99M85 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm11105-201ENSMUST00000112781 478 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm15901-201ENSMUST00000117663 941 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm12650-201ENSMUST00000121966 258 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm24731-201ENSMUST00000158227 131 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm21772-201ENSMUST00000169213 478 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm3242-201ENSMUST00000171273 485 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm17126-201ENSMUST00000172276 523 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Mir7006-201ENSMUST00000183624 69 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm8506-201ENSMUST00000186661 829 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm35013-201ENSMUST00000197218 832 ntBASIC5.32□□□□□ -1.56
Scrt1Q99M85 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms