Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm14054-201ENSMUST00000120744 704 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm12804-201ENSMUST00000121030 999 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm11472-201ENSMUST00000121305 556 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm24186-201ENSMUST00000157983 127 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm29464-201ENSMUST00000187692 513 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm3544-201ENSMUST00000196129 305 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm29736-201ENSMUST00000198189 385 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm19764-201ENSMUST00000203630 649 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm6702-201ENSMUST00000208496 471 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gm19212-201ENSMUST00000216642 862 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lsm1Q8VC85 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm15765-201ENSMUST00000118407 910 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm6654-201ENSMUST00000118950 348 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm7494-201ENSMUST00000121248 441 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm12369-201ENSMUST00000121343 942 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm16298-201ENSMUST00000161107 420 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm27037-201ENSMUST00000182270 960 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm44053-201ENSMUST00000203364 929 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm45008-201ENSMUST00000206420 493 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Lsm1Q8VC85 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms