Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Nup88Q8CEC0 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Nup88Q8CEC0 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Nup88Q8CEC0 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Nup88Q8CEC0 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm45426-201ENSMUST00000209393 3672 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm45413-201ENSMUST00000210389 3538 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm22952-201ENSMUST00000116720 120 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm13641-201ENSMUST00000117993 473 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm14998-201ENSMUST00000120502 495 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm8317-201ENSMUST00000121261 471 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm24719-201ENSMUST00000157520 110 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm24395-201ENSMUST00000158139 125 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm22530-201ENSMUST00000158820 118 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm16269-201ENSMUST00000160532 409 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm26923-201ENSMUST00000182615 996 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Mir6971-201ENSMUST00000183497 63 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Mir6952-201ENSMUST00000185092 61 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm43382-201ENSMUST00000198954 838 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm19033-201ENSMUST00000208516 964 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Snora44-201ENSMUST00000082670 129 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Naip3-201ENSMUST00000118082 4208 ntBASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup88Q8CEC0 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm14938-201ENSMUST00000119482 943 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm15959-201ENSMUST00000121724 368 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm23995-201ENSMUST00000158060 129 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm19560-201ENSMUST00000177510 514 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm2539-203ENSMUST00000181352 746 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm27960-201ENSMUST00000183445 184 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm5306-201ENSMUST00000203325 757 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm33178-201ENSMUST00000212090 257 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 AC132384.8-201ENSMUST00000218152 1204 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm18592-201ENSMUST00000221529 276 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm22300-201ENSMUST00000082661 126 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Nup88Q8CEC0 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms