Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm5937-201ENSMUST00000119715 643 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm14826-201ENSMUST00000121284 901 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm6286-201ENSMUST00000145247 762 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm14262-201ENSMUST00000148309 326 ntTSL 3 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm23553-201ENSMUST00000157817 295 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 n-R5s112-201ENSMUST00000178208 119 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 n-R5s125-201ENSMUST00000179377 119 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 n-R5s120-201ENSMUST00000180000 119 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm32033-201ENSMUST00000193483 339 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm37997-201ENSMUST00000193515 267 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm45487-201ENSMUST00000211039 545 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 AC113107.1-201ENSMUST00000218358 396 ntTSL 3 BASIC8.96□□□□□ -0.98
Trim35Q8C006 AC105407.3-201ENSMUST00000224161 648 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 CT025533.1-201ENSMUST00000227485 706 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 AC137961.1-201ENSMUST00000227924 734 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 CT025535.1-202ENSMUST00000228291 241 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Tmem202-201ENSMUST00000055345 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Mir212-201ENSMUST00000083656 91 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 n-R5s33-201ENSMUST00000093713 119 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 AC158388.2-201ENSMUST00000223665 1314 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm28187-201ENSMUST00000186885 2134 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm26583-201ENSMUST00000181436 3684 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm37813-201ENSMUST00000195003 3695 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm12904-201ENSMUST00000117451 1399 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm18913-201ENSMUST00000204311 1789 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm38299-201ENSMUST00000193214 3789 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.96□□□□□ -0.98
Trim35Q8C006 Ugt1a6a-202ENSMUST00000113134 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim35Q8C006 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim35Q8C006 Gm42811-201ENSMUST00000201951 2768 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Ypel5-201ENSMUST00000045174 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gbp2-201ENSMUST00000165774 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm17031-201ENSMUST00000016698 1669 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm43890-201ENSMUST00000203437 2799 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm22546-201ENSMUST00000104351 130 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm10651-201ENSMUST00000118212 609 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm11922-201ENSMUST00000118967 475 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm15750-201ENSMUST00000120970 616 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm14967-201ENSMUST00000153483 335 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm23780-201ENSMUST00000157937 275 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm23262-201ENSMUST00000158323 168 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm24349-201ENSMUST00000158709 101 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm10074-201ENSMUST00000174543 249 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Tcstv3-201ENSMUST00000178349 510 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm8957-201ENSMUST00000182082 1012 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm17813-201ENSMUST00000185377 328 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm45014-201ENSMUST00000207657 405 ntTSL 3 BASIC8.95□□□□□ -0.98
Trim35Q8C006 AC135019.1-201ENSMUST00000219949 307 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm5111-201ENSMUST00000064744 964 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms