Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.34□□□□□ -1.07
Usp47Q8BY87 AC134254.2-201ENSMUST00000221262 170 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm23624-201ENSMUST00000082463 321 ntBASIC8.34□□□□□ -1.07
Usp47Q8BY87 Gm38362-201ENSMUST00000192999 2064 ntBASIC8.34□□□□□ -1.08
Usp47Q8BY87 Gm44193-201ENSMUST00000204822 2523 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm20300-201ENSMUST00000214634 3440 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm37221-201ENSMUST00000194472 3007 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm37482-201ENSMUST00000194899 2791 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 AC130661.1-201ENSMUST00000218248 1680 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm42892-201ENSMUST00000196227 3973 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm42881-201ENSMUST00000198636 3344 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm15840-201ENSMUST00000122099 943 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm38131-201ENSMUST00000192449 430 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm43467-201ENSMUST00000197441 437 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm7890-201ENSMUST00000204877 601 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm6056-201ENSMUST00000221253 488 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm5321-201ENSMUST00000072050 447 ntBASIC8.33□□□□□ -1.08
Usp47Q8BY87 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Usp47Q8BY87 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm9239-201ENSMUST00000186942 2557 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm8545-201ENSMUST00000120692 801 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Mir5112-201ENSMUST00000174897 60 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Mir219c-201ENSMUST00000199860 60 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm34149-201ENSMUST00000203547 304 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 AC166358.9-201ENSMUST00000220653 375 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.32□□□□□ -1.08
Usp47Q8BY87 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp47Q8BY87 Gm37897-201ENSMUST00000192613 3561 ntBASIC8.31□□□□□ -1.08
Usp47Q8BY87 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Gm24731-201ENSMUST00000158227 131 ntBASIC8.31□□□□□ -1.08
Usp47Q8BY87 Mir3572-201ENSMUST00000175549 86 ntBASIC8.31□□□□□ -1.08
Usp47Q8BY87 Gm20770-201ENSMUST00000193474 694 ntBASIC8.31□□□□□ -1.08
Usp47Q8BY87 Gm17988-201ENSMUST00000208796 535 ntBASIC8.31□□□□□ -1.08
Usp47Q8BY87 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Mir331-201ENSMUST00000083673 96 ntBASIC8.31□□□□□ -1.08
Usp47Q8BY87 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp47Q8BY87 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp47Q8BY87 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp47Q8BY87 AC153959.1-201ENSMUST00000213617 1694 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Gm37914-201ENSMUST00000195317 2679 ntBASIC8.3□□□□□ -1.08
Usp47Q8BY87 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms