Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Chmp2bQ8BJF9 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp2bQ8BJF9 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Chmp2bQ8BJF9 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.09□□□□□ -1.44
Chmp2bQ8BJF9 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Chmp2bQ8BJF9 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm25877-201ENSMUST00000104326 129 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm11445-201ENSMUST00000119101 532 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm15181-201ENSMUST00000120142 177 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm4202-201ENSMUST00000169025 733 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm26557-201ENSMUST00000180756 493 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm20561-201ENSMUST00000188131 292 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm43743-202ENSMUST00000198353 491 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm42824-201ENSMUST00000199361 247 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm8479-201ENSMUST00000203825 718 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 AC132433.1-201ENSMUST00000221553 1101 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm24041-201ENSMUST00000083115 156 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.08□□□□□ -1.44
Chmp2bQ8BJF9 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm11256-201ENSMUST00000118109 829 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm11990-201ENSMUST00000121505 897 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm25843-201ENSMUST00000122582 314 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm27037-201ENSMUST00000182270 960 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm29464-201ENSMUST00000187692 513 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm18689-201ENSMUST00000203969 902 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp2bQ8BJF9 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms