Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Gm20549-201ENSMUST00000174804 429 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Gm22650-201ENSMUST00000175138 105 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Gm4587-201ENSMUST00000209135 637 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Nup98Q6PFD9 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.91□□□□□ -1.3
Nup98Q6PFD9 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm11804-201ENSMUST00000121663 468 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm29454-201ENSMUST00000190805 393 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm37308-201ENSMUST00000194684 100 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm44132-201ENSMUST00000205142 151 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm45185-201ENSMUST00000207556 404 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm7990-201ENSMUST00000212126 593 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup98Q6PFD9 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm22895-201ENSMUST00000157508 308 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm7335-201ENSMUST00000172475 373 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm27985-201ENSMUST00000185112 378 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm38040-201ENSMUST00000193505 225 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm31306-201ENSMUST00000197517 508 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm9278-201ENSMUST00000205508 553 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.9□□□□□ -1.31
Nup98Q6PFD9 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.9□□□□□ -1.31
Nup98Q6PFD9 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm24230-201ENSMUST00000104313 129 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm15186-201ENSMUST00000119345 563 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm15044-201ENSMUST00000120703 598 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm24236-201ENSMUST00000157794 134 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms