Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox9Q04887 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Gm25810-201ENSMUST00000082752 108 ntBASIC6.81□□□□□ -1.32
Sox9Q04887 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.81□□□□□ -1.32
Sox9Q04887 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Sox9Q04887 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox9Q04887 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox9Q04887 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox9Q04887 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.81□□□□□ -1.32
Sox9Q04887 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox9Q04887 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox9Q04887 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Sox9Q04887 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.8□□□□□ -1.32
Sox9Q04887 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm23910-201ENSMUST00000104597 132 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm13731-201ENSMUST00000117332 196 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm23408-201ENSMUST00000158523 265 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm22548-201ENSMUST00000174899 78 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Mir3062-201ENSMUST00000174986 105 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Mir5107-201ENSMUST00000175586 88 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm18416-201ENSMUST00000175635 1003 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm20691-201ENSMUST00000176889 333 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm27006-201ENSMUST00000182218 943 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm26923-201ENSMUST00000182615 996 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm27033-201ENSMUST00000183226 544 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm28503-201ENSMUST00000185966 147 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm20932-201ENSMUST00000189115 694 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm37989-201ENSMUST00000195202 803 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm43724-201ENSMUST00000197516 226 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Mir1892-201ENSMUST00000197752 80 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm42646-201ENSMUST00000202233 914 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm44253-201ENSMUST00000203387 628 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm45122-201ENSMUST00000206376 784 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 LOC665443-201ENSMUST00000212284 796 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Gm19116-201ENSMUST00000218592 642 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 AC167192.4-201ENSMUST00000224087 993 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox9Q04887 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.8□□□□□ -1.32
Sox9Q04887 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.8□□□□□ -1.32
Sox9Q04887 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox9Q04887 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox9Q04887 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms