Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Mir449c-201ENSMUST00000102192 109 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm22276-201ENSMUST00000122469 129 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm9671-201ENSMUST00000171502 547 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm3605-201ENSMUST00000185858 440 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm6056-201ENSMUST00000221253 488 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm9269-201ENSMUST00000221661 578 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm5830-201ENSMUST00000049117 443 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm16335-201ENSMUST00000077495 309 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nkx3-1P97436 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.23□□□□□ -1.57
Nkx3-1P97436 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms