Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox3P53784 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.83□□□□□ -1.48
Sox3P53784 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Sox3P53784 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.83□□□□□ -1.48
Sox3P53784 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.83□□□□□ -1.48
Sox3P53784 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Sox3P53784 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox3P53784 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Sox3P53784 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.83□□□□□ -1.48
Sox3P53784 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox3P53784 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox3P53784 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox3P53784 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox3P53784 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm14512-201ENSMUST00000117924 230 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm12583-201ENSMUST00000120677 853 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.82□□□□□ -1.48
Sox3P53784 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm22094-201ENSMUST00000158976 117 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm9529-201ENSMUST00000177598 579 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm26595-201ENSMUST00000181585 484 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm1972-201ENSMUST00000181606 964 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Mir7685-201ENSMUST00000183555 62 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm2950-201ENSMUST00000185530 520 ntBASIC5.82□□□□□ -1.48
Sox3P53784 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm44265-201ENSMUST00000203631 465 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.82□□□□□ -1.48
Sox3P53784 Gm9685-201ENSMUST00000211275 538 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm6562-201ENSMUST00000221903 464 ntBASIC5.82□□□□□ -1.48
Sox3P53784 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Robo2-210ENSMUST00000226478 8059 ntBASIC5.82□□□□□ -1.48
Sox3P53784 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.82□□□□□ -1.48
Sox3P53784 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm16335-201ENSMUST00000077495 309 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Gm24525-201ENSMUST00000082917 151 ntBASIC5.82□□□□□ -1.48
Sox3P53784 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sox3P53784 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox3P53784 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.82□□□□□ -1.48
Sox3P53784 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox3P53784 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox3P53784 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox3P53784 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sox3P53784 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Sox3P53784 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sox3P53784 Lipe-203ENSMUST00000105177 1251 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm8501-201ENSMUST00000117684 432 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm15621-201ENSMUST00000119162 364 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm11804-201ENSMUST00000121663 468 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms