Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC6.73□□□□□ -1.33
Brca1P48754 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.73□□□□□ -1.33
Brca1P48754 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Brca1P48754 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Brca1P48754 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brca1P48754 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Brca1P48754 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.73□□□□□ -1.33
Brca1P48754 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Brca1P48754 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.73□□□□□ -1.33
Brca1P48754 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Brca1P48754 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.73□□□□□ -1.33
Brca1P48754 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brca1P48754 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Brca1P48754 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brca1P48754 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brca1P48754 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brca1P48754 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Brca1P48754 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Gm25537-201ENSMUST00000103851 109 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Gm20674-201ENSMUST00000177452 369 ntBASIC6.72□□□□□ -1.33
Brca1P48754 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.72□□□□□ -1.33
Brca1P48754 Gm43078-201ENSMUST00000197222 168 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Gm6543-201ENSMUST00000197353 808 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Gm45082-201ENSMUST00000206082 601 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.72□□□□□ -1.33
Brca1P48754 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Gm19786-201ENSMUST00000222589 580 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.72□□□□□ -1.33
Brca1P48754 Zfp429-203ENSMUST00000224684 524 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Brca1P48754 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brca1P48754 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Brca1P48754 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.72□□□□□ -1.33
Brca1P48754 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Brca1P48754 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Brca1P48754 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.72□□□□□ -1.33
Brca1P48754 Gm23948-201ENSMUST00000104030 132 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.71□□□□□ -1.33
Brca1P48754 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.71□□□□□ -1.33
Brca1P48754 Gm25383-201ENSMUST00000157810 144 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Brca1P48754 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Brca1P48754 Gm18427-201ENSMUST00000195422 515 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Gm43973-201ENSMUST00000203562 210 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.71□□□□□ -1.33
Brca1P48754 Gm40692-201ENSMUST00000220411 491 ntBASIC6.71□□□□□ -1.33
Brca1P48754 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.71□□□□□ -1.33
Brca1P48754 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Gm22807-201ENSMUST00000082737 129 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Gm9386-201ENSMUST00000095195 381 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Brca1P48754 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.71□□□□□ -1.33
Brca1P48754 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Brca1P48754 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
Brca1P48754 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Brca1P48754 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.71□□□□□ -1.34
Brca1P48754 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Gm24940-201ENSMUST00000158326 108 ntBASIC6.71□□□□□ -1.34
Brca1P48754 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.71□□□□□ -1.34
Brca1P48754 Gm9499-201ENSMUST00000180888 964 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm29124-201ENSMUST00000186576 452 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.71□□□□□ -1.34
Brca1P48754 Gm29376-201ENSMUST00000189357 835 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm29755-201ENSMUST00000196976 948 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm42663-201ENSMUST00000199883 351 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm44053-201ENSMUST00000203364 929 ntBASIC6.71□□□□□ -1.34
Brca1P48754 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.71□□□□□ -1.34
Brca1P48754 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Brca1P48754 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Brca1P48754 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Brca1P48754 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Brca1P48754 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms