Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sdc1P18828 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
Sdc1P18828 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 CT030185.2-201ENSMUST00000222614 1310 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm12931-201ENSMUST00000117046 324 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm14733-201ENSMUST00000117680 133 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm12442-201ENSMUST00000118372 338 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm12817-201ENSMUST00000119622 610 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm12307-201ENSMUST00000120581 590 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm11679-201ENSMUST00000121830 779 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm23884-201ENSMUST00000122687 294 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC4.79□□□□□ -1.64
Sdc1P18828 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC4.79□□□□□ -1.64
Sdc1P18828 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC4.79□□□□□ -1.64
Sdc1P18828 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm23229-201ENSMUST00000157297 105 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Snora47-201ENSMUST00000157483 138 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm23822-201ENSMUST00000158739 128 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm8582-201ENSMUST00000164061 789 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm20480-201ENSMUST00000173953 250 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm27295-201ENSMUST00000184264 153 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm37503-201ENSMUST00000192088 319 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm3103-201ENSMUST00000198073 752 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm23604-202ENSMUST00000198428 137 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm43748-201ENSMUST00000202329 1233 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm43895-201ENSMUST00000203219 855 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm45279-201ENSMUST00000210315 391 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sdc1P18828 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm19340-201ENSMUST00000221995 345 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm4808-201ENSMUST00000222283 1203 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm2614-201ENSMUST00000223227 403 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gcnt2-204ENSMUST00000223570 335 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 AC163743.1-201ENSMUST00000224309 270 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 AC154250.1-201ENSMUST00000224775 489 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm5229-201ENSMUST00000039375 354 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm4822-201ENSMUST00000077551 479 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm10145-201ENSMUST00000077776 462 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Gm23624-201ENSMUST00000082463 321 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sdc1P18828 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.79□□□□□ -1.64
Sdc1P18828 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sdc1P18828 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Mir546-201ENSMUST00000102105 121 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm24986-201ENSMUST00000104452 132 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm16394-201ENSMUST00000117289 675 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm11561-201ENSMUST00000117429 417 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm5270-201ENSMUST00000121506 1002 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm15696-201ENSMUST00000121730 445 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm16357-201ENSMUST00000144091 474 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm23115-201ENSMUST00000158480 108 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm18808-201ENSMUST00000173316 462 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm27299-201ENSMUST00000184593 103 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms