Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm25564-201ENSMUST00000104604 132 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Gm7670-201ENSMUST00000121272 641 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.98□□□□□ -1.29
Col1a1P11087 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm28429-201ENSMUST00000188521 363 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Gm29376-201ENSMUST00000189357 835 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.98□□□□□ -1.29
Col1a1P11087 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.98□□□□□ -1.29
Col1a1P11087 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.98□□□□□ -1.29
Col1a1P11087 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.98□□□□□ -1.29
Col1a1P11087 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col1a1P11087 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col1a1P11087 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.97□□□□□ -1.29
Col1a1P11087 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Gm4962-201ENSMUST00000199640 2977 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.97□□□□□ -1.29
Col1a1P11087 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.97□□□□□ -1.29
Col1a1P11087 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col1a1P11087 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Gm15877-201ENSMUST00000121897 964 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Gm24940-201ENSMUST00000158326 108 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Gm18702-201ENSMUST00000196923 588 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Gm43973-201ENSMUST00000203562 210 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.97□□□□□ -1.29
Col1a1P11087 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.97□□□□□ -1.29
Col1a1P11087 Gm19189-201ENSMUST00000221689 754 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.97□□□□□ -1.29
Col1a1P11087 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.97□□□□□ -1.29
Col1a1P11087 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col1a1P11087 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col1a1P11087 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col1a1P11087 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col1a1P11087 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col1a1P11087 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col1a1P11087 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.96□□□□□ -1.29
Col1a1P11087 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Col1a1P11087 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col1a1P11087 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col1a1P11087 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col1a1P11087 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Gm13488-201ENSMUST00000120419 179 ntBASIC6.96□□□□□ -1.3
Col1a1P11087 Gm14679-201ENSMUST00000121536 722 ntBASIC6.96□□□□□ -1.3
Col1a1P11087 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC6.96□□□□□ -1.3
Col1a1P11087 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.96□□□□□ -1.3
Col1a1P11087 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Gm35648-201ENSMUST00000202304 475 ntBASIC6.96□□□□□ -1.3
Col1a1P11087 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.96□□□□□ -1.3
Col1a1P11087 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col1a1P11087 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Col1a1P11087 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.96□□□□□ -1.3
Col1a1P11087 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col1a1P11087 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col1a1P11087 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col1a1P11087 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms