Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Chmp6P0C0A3 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm24434-201ENSMUST00000104081 132 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm14382-201ENSMUST00000117374 437 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm7952-201ENSMUST00000180540 984 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Mir6362-201ENSMUST00000184329 107 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm29385-201ENSMUST00000186831 363 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm6631-201ENSMUST00000193699 559 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm43392-201ENSMUST00000196560 434 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm44382-201ENSMUST00000198683 122 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm9088-201ENSMUST00000220237 508 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 AV026068-216ENSMUST00000223874 328 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.47□□□□□ -1.37
Chmp6P0C0A3 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Chmp6P0C0A3 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.46□□□□□ -1.37
Chmp6P0C0A3 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm25345-201ENSMUST00000104505 133 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm14349-201ENSMUST00000137155 902 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm23757-201ENSMUST00000158353 100 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm5430-201ENSMUST00000182525 915 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm44251-201ENSMUST00000204963 442 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm7499-201ENSMUST00000210423 813 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Chmp6P0C0A3 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Gm25917-201ENSMUST00000104267 130 ntBASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.45□□□□□ -1.38
Chmp6P0C0A3 Gm8501-201ENSMUST00000117684 432 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms