Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm4789-201ENSMUST00000121708 1216 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm8550-201ENSMUST00000161621 653 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm37581-201ENSMUST00000192371 988 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm7019-201ENSMUST00000194122 369 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm29784-201ENSMUST00000196217 406 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm19088-201ENSMUST00000198800 566 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm18805-201ENSMUST00000206872 655 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm4585-201ENSMUST00000207218 452 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm19056-201ENSMUST00000218220 797 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm19186-201ENSMUST00000219922 333 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC4.77□□□□□ -1.65
Hmgb3O54879 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 AC154563.1-201ENSMUST00000228317 442 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm5949-201ENSMUST00000213468 1421 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm38142-201ENSMUST00000194093 3555 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hmgb3O54879 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.77□□□□□ -1.65
Hmgb3O54879 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hmgb3O54879 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hmgb3O54879 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Hmgb3O54879 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm14659-201ENSMUST00000117667 843 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm13811-201ENSMUST00000117800 256 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm11990-201ENSMUST00000121505 897 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm12322-201ENSMUST00000121605 389 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm16260-201ENSMUST00000155141 304 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm25277-201ENSMUST00000157266 324 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm23674-201ENSMUST00000157473 131 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm2976-201ENSMUST00000160362 513 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm3140-201ENSMUST00000163523 481 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm28195-201ENSMUST00000186992 372 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm43189-201ENSMUST00000196040 3069 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm21048-201ENSMUST00000202470 1166 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC4.76□□□□□ -1.65
Hmgb3O54879 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC4.76□□□□□ -1.65
Hmgb3O54879 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm18329-201ENSMUST00000215832 589 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 AC166323.1-201ENSMUST00000217756 367 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms