Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Mir761-201ENSMUST00000103245 76 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm26140-201ENSMUST00000103807 110 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm14107-201ENSMUST00000117774 330 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm15905-201ENSMUST00000137042 298 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Mir5710-201ENSMUST00000176884 69 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm5473-201ENSMUST00000179326 642 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm9038-201ENSMUST00000203400 604 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Clec2j-202ENSMUST00000203658 606 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm44603-201ENSMUST00000206820 367 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm14725-201ENSMUST00000120324 828 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm13214-201ENSMUST00000122137 408 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm26023-201ENSMUST00000122722 313 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col6a3E9PWQ3 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm23692-201ENSMUST00000101881 160 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm4989-201ENSMUST00000118711 749 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm5185-201ENSMUST00000080271 619 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 Gm18632-201ENSMUST00000222597 2087 ntBASIC5.71□□□□□ -1.5
Col6a3E9PWQ3 AC138284.3-201ENSMUST00000217345 4663 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm8367-201ENSMUST00000186145 887 ntBASIC5.7□□□□□ -1.5
Col6a3E9PWQ3 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms