Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm13641-201ENSMUST00000117993 473 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm12583-201ENSMUST00000120677 853 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm14212-201ENSMUST00000122023 826 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Mir6244-201ENSMUST00000184156 117 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm37341-201ENSMUST00000194680 371 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm18427-201ENSMUST00000195422 515 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm43946-201ENSMUST00000204058 886 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm18413-201ENSMUST00000221573 655 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm23624-201ENSMUST00000082463 321 ntBASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upk3aQ9JKX8 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm12193-201ENSMUST00000117250 379 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm24435-201ENSMUST00000157886 110 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Mir1945-201ENSMUST00000157919 78 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm15970-201ENSMUST00000160623 834 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm9597-201ENSMUST00000171913 602 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm22655-201ENSMUST00000174949 96 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Mir6952-201ENSMUST00000185092 61 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm412-201ENSMUST00000193360 948 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm8930-201ENSMUST00000201693 768 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm43105-201ENSMUST00000202987 459 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm44768-201ENSMUST00000205719 393 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm23737-201ENSMUST00000082547 159 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Upk3aQ9JKX8 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Upk3aQ9JKX8 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms