Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim39Q9ESN2 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm22022-201ENSMUST00000104355 127 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm11821-201ENSMUST00000117335 979 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm13229-201ENSMUST00000118238 340 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm13162-201ENSMUST00000121481 454 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm23867-201ENSMUST00000122649 274 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm23269-201ENSMUST00000178701 107 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Mir6340-201ENSMUST00000183857 119 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Mir8118-201ENSMUST00000183962 129 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm18033-201ENSMUST00000186678 550 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm29562-201ENSMUST00000190113 904 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm25578-201ENSMUST00000083406 104 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim39Q9ESN2 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm23133-201ENSMUST00000104255 135 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm14197-201ENSMUST00000117480 1049 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm14048-201ENSMUST00000121864 1268 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Mir1962-201ENSMUST00000157516 121 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm16134-201ENSMUST00000161714 336 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm17097-201ENSMUST00000166414 714 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm8256-201ENSMUST00000169178 453 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm6838-201ENSMUST00000172851 582 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm23945-201ENSMUST00000179609 92 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm21171-201ENSMUST00000180048 673 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm29563-201ENSMUST00000187249 496 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm28546-201ENSMUST00000188221 615 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm18900-201ENSMUST00000193218 584 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm8925-201ENSMUST00000197212 763 ntBASIC6.84□□□□□ -1.31
Trim39Q9ESN2 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms