Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm12813-201ENSMUST00000119615 902 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm14294-201ENSMUST00000119749 751 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm13438-201ENSMUST00000120100 573 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm11990-201ENSMUST00000121505 897 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm15696-201ENSMUST00000121730 445 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm17511-201ENSMUST00000172206 342 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm27006-201ENSMUST00000182218 943 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm37774-201ENSMUST00000194401 245 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm5886-202ENSMUST00000203957 522 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.82□□□□□ -1.48
Lima1Q9ERG0 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm14054-201ENSMUST00000120744 704 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm8722-201ENSMUST00000121466 769 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm8550-201ENSMUST00000161621 653 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm6541-201ENSMUST00000165542 561 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm24812-201ENSMUST00000175315 284 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm7413-201ENSMUST00000219498 462 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lima1Q9ERG0 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm24069-201ENSMUST00000104512 127 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms