Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm16511-201ENSMUST00000120019 564 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm23954-201ENSMUST00000157213 353 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm23894-201ENSMUST00000158107 313 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Olfr331-202ENSMUST00000170501 957 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm27854-201ENSMUST00000175578 244 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Mir5107-201ENSMUST00000175586 88 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Mir7653-201ENSMUST00000184358 61 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Mir6361-201ENSMUST00000185079 101 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm44312-201ENSMUST00000203536 469 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.81□□□□□ -1.32
Smc1aQ9CU62 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm13114-201ENSMUST00000117605 106 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm13740-201ENSMUST00000120590 310 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm23162-201ENSMUST00000175081 121 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Mir6971-201ENSMUST00000183497 63 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm27853-201ENSMUST00000184176 250 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm28934-201ENSMUST00000186491 346 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm28973-201ENSMUST00000189310 613 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm42799-201ENSMUST00000201331 328 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm18628-201ENSMUST00000220584 475 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Olfr467-201ENSMUST00000084756 927 ntBASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Smc1aQ9CU62 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm23632-201ENSMUST00000175289 125 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms