Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm16044-201ENSMUST00000118475 450 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm16418-201ENSMUST00000118577 171 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm12308-201ENSMUST00000120440 389 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm11990-201ENSMUST00000121505 897 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm5843-201ENSMUST00000121631 476 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm22852-201ENSMUST00000177899 101 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm27782-201ENSMUST00000185059 199 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm6562-201ENSMUST00000221903 464 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.63□□□□□ -1.51
Use1Q9CQ56 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.63□□□□□ -1.51
Use1Q9CQ56 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm25593-201ENSMUST00000102272 96 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm25346-201ENSMUST00000104509 128 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm14116-201ENSMUST00000117733 805 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm15840-201ENSMUST00000122099 943 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Olfr331-202ENSMUST00000170501 957 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Mir5128-201ENSMUST00000175217 84 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms