Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm33178-201ENSMUST00000212090 257 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 CU024910.1-201ENSMUST00000214310 418 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 AC157017.2-201ENSMUST00000218354 777 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 CT010480.5-201ENSMUST00000225026 217 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Gm9800-201ENSMUST00000052615 336 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Snora21-201ENSMUST00000082967 137 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.46□□□□□ -1.22
Clp1Q99LI9 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clp1Q99LI9 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm13555-201ENSMUST00000121668 319 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm15038-201ENSMUST00000122144 296 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm23754-201ENSMUST00000157576 63 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm23810-201ENSMUST00000175150 74 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm4956-202ENSMUST00000178869 672 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm26652-202ENSMUST00000181672 475 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Mir3473g-201ENSMUST00000183494 136 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm27636-201ENSMUST00000184528 122 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm18406-201ENSMUST00000185872 669 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm29600-201ENSMUST00000188687 377 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm29784-201ENSMUST00000196217 406 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm44604-201ENSMUST00000205475 496 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm38574-201ENSMUST00000211855 640 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Mir3068-201ENSMUST00000083004 136 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm24254-201ENSMUST00000083702 104 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm22351-201ENSMUST00000083925 107 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm24032-201ENSMUST00000083932 159 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.45□□□□□ -1.22
Clp1Q99LI9 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clp1Q99LI9 Tmem161b-206ENSMUST00000225069 2414 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms