Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Pcdhb7Q8CDY9 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.52□□□□□ -1.21
Pcdhb7Q8CDY9 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm43092-201ENSMUST00000202986 1854 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Lipe-203ENSMUST00000105177 1251 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm24195-201ENSMUST00000116804 137 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm14580-201ENSMUST00000119122 718 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm13603-201ENSMUST00000119404 83 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm4992-201ENSMUST00000120256 768 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm11838-201ENSMUST00000121999 231 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm23117-201ENSMUST00000158482 108 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Cfap61-214ENSMUST00000167179 183 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm18808-201ENSMUST00000173316 462 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm21815-201ENSMUST00000178213 664 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Mir6340-201ENSMUST00000183857 119 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Mir7093-201ENSMUST00000184195 101 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm29562-201ENSMUST00000190113 904 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm37341-201ENSMUST00000194680 371 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm43370-201ENSMUST00000196437 284 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm23604-202ENSMUST00000198428 137 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm42472-201ENSMUST00000201626 859 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm7890-201ENSMUST00000204877 601 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm18601-201ENSMUST00000220831 634 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm9249-201ENSMUST00000221420 578 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 AC154510.1-201ENSMUST00000223925 737 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm25079-201ENSMUST00000082529 203 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Gm8204-201ENSMUST00000185696 2144 ntBASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Pcdhb7Q8CDY9 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm336-201ENSMUST00000186376 1480 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm37553-201ENSMUST00000194135 1602 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm26014-201ENSMUST00000104405 132 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm24071-201ENSMUST00000104520 132 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm14756-201ENSMUST00000116395 240 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Mir467g-201ENSMUST00000116906 120 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm12370-201ENSMUST00000117809 604 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm11322-201ENSMUST00000118095 435 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.5□□□□□ -1.21
Pcdhb7Q8CDY9 Gm14785-201ENSMUST00000120185 539 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms