Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm43436-201ENSMUST00000199308 147 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm21461-201ENSMUST00000200382 863 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm31861-201ENSMUST00000204563 672 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm44849-201ENSMUST00000207595 484 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm18329-201ENSMUST00000215832 589 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm33312-201ENSMUST00000222443 332 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
Vps53Q8CCB4 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm25795-201ENSMUST00000104421 132 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm12094-201ENSMUST00000121781 472 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm23894-201ENSMUST00000158107 313 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm26211-201ENSMUST00000158578 129 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm17063-201ENSMUST00000168135 456 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm29588-201ENSMUST00000185738 298 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm38280-201ENSMUST00000192610 158 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm45071-201ENSMUST00000205353 571 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm9535-201ENSMUST00000218499 768 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm10540-201ENSMUST00000097581 276 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Gm42819-201ENSMUST00000199630 5121 ntBASIC7.2□□□□□ -1.26
Vps53Q8CCB4 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Vps53Q8CCB4 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm26289-201ENSMUST00000104169 131 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm24989-201ENSMUST00000104461 88 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm9836-201ENSMUST00000117132 216 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm23343-201ENSMUST00000158964 143 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Mir7037-201ENSMUST00000184414 65 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Mir6361-201ENSMUST00000185079 101 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm43531-201ENSMUST00000200676 1114 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm44239-201ENSMUST00000204228 271 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm44845-201ENSMUST00000208773 335 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm19195-201ENSMUST00000222018 511 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 AC131743.3-201ENSMUST00000222099 662 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm43682-201ENSMUST00000202150 2090 ntBASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms