Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14000-201ENSMUST00000118670 233 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm7916-201ENSMUST00000120325 456 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm12104-201ENSMUST00000120359 979 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm13940-201ENSMUST00000121023 301 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm12881-201ENSMUST00000121191 203 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm24057-201ENSMUST00000158616 302 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm8358-201ENSMUST00000167222 555 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm26455-201ENSMUST00000175300 92 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm28579-201ENSMUST00000186143 369 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm28418-201ENSMUST00000186179 423 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm21803-201ENSMUST00000188897 693 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm28567-201ENSMUST00000190270 693 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm37313-201ENSMUST00000191673 290 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm37044-201ENSMUST00000193531 693 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm38369-201ENSMUST00000195101 693 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm34424-201ENSMUST00000213400 782 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm46379-201ENSMUST00000222551 265 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 CT009713.9-201ENSMUST00000223604 389 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 AC132112.1-201ENSMUST00000226354 505 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm5514-201ENSMUST00000060477 306 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm10108-201ENSMUST00000078246 319 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim47Q8C0E3 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm26417-201ENSMUST00000104274 135 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm22091-201ENSMUST00000116908 127 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm8812-201ENSMUST00000118496 412 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm11903-201ENSMUST00000118958 727 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm13900-201ENSMUST00000119402 498 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm15060-201ENSMUST00000119550 948 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm15129-201ENSMUST00000119673 279 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm16445-201ENSMUST00000120399 714 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm5646-201ENSMUST00000120568 714 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm11257-201ENSMUST00000121313 315 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm13221-201ENSMUST00000121712 430 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm14728-201ENSMUST00000122196 492 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm24592-201ENSMUST00000122505 106 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm25640-201ENSMUST00000175378 125 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm5709-201ENSMUST00000177879 1165 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm15143-201ENSMUST00000178180 714 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm5947-201ENSMUST00000179156 714 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm5645-201ENSMUST00000179597 714 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm27018-201ENSMUST00000181136 225 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Mir6341-201ENSMUST00000183490 121 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms