Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm24709-201ENSMUST00000104123 132 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm13772-201ENSMUST00000118431 317 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm14970-201ENSMUST00000122289 355 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Mir6362-201ENSMUST00000184329 107 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm7802-201ENSMUST00000216464 262 ntBASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Upf3bQ3ULL6 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm23739-201ENSMUST00000102295 108 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm25917-201ENSMUST00000104267 130 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm11990-201ENSMUST00000121505 897 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm6074-201ENSMUST00000193340 451 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm36262-201ENSMUST00000223274 499 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Cma2-202ENSMUST00000228263 857 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm24200-201ENSMUST00000082955 157 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms