Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm5694-201ENSMUST00000195648 641 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm5229-201ENSMUST00000039375 354 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm26144-201ENSMUST00000104475 132 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm8250-201ENSMUST00000117398 774 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm15765-201ENSMUST00000118407 910 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm12438-201ENSMUST00000122034 336 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm23631-201ENSMUST00000175291 123 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm28973-201ENSMUST00000189310 613 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm18805-201ENSMUST00000206872 655 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm22684-201ENSMUST00000082849 132 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.34□□□□□ -1.39
Trim43aQ3TL54 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
Trim43aQ3TL54 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.34□□□□□ -1.4
Trim43aQ3TL54 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trim43aQ3TL54 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.34□□□□□ -1.4
Trim43aQ3TL54 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm24272-201ENSMUST00000102329 98 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm11799-201ENSMUST00000116110 460 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm12099-201ENSMUST00000118660 750 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Mir1903-201ENSMUST00000122574 80 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm24363-201ENSMUST00000158440 311 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm43850-201ENSMUST00000202021 578 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm18600-201ENSMUST00000207205 505 ntBASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim43aQ3TL54 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms