Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm22439-201ENSMUST00000104048 132 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm17170-201ENSMUST00000112785 316 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm13400-201ENSMUST00000117436 380 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm25807-201ENSMUST00000122783 305 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm23497-201ENSMUST00000157738 130 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm23034-201ENSMUST00000158001 147 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm18417-201ENSMUST00000176564 648 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm4956-202ENSMUST00000178869 672 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.54□□□□□ -1.36
Msx2Q03358 Mir6337-201ENSMUST00000184194 105 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm28142-201ENSMUST00000186899 698 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm43035-201ENSMUST00000197626 517 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm43794-201ENSMUST00000200971 692 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm2767-201ENSMUST00000209582 473 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm18338-201ENSMUST00000222381 560 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 AC154329.2-201ENSMUST00000225257 383 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msx2Q03358 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm20900-201ENSMUST00000078729 472 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Gm24707-201ENSMUST00000082812 107 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msx2Q03358 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.54□□□□□ -1.36
Msx2Q03358 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Msx2Q03358 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msx2Q03358 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.54□□□□□ -1.36
Msx2Q03358 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msx2Q03358 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.53□□□□□ -1.36
Msx2Q03358 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msx2Q03358 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Msx2Q03358 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Msx2Q03358 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msx2Q03358 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msx2Q03358 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 Mir708-201ENSMUST00000102189 109 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 Gm24373-201ENSMUST00000104393 132 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC6.53□□□□□ -1.36
Msx2Q03358 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msx2Q03358 Gm14248-201ENSMUST00000117790 544 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm13196-201ENSMUST00000118297 379 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm16418-201ENSMUST00000118577 171 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm15659-201ENSMUST00000118881 341 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm13207-201ENSMUST00000119862 773 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm11371-201ENSMUST00000120294 385 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm15390-201ENSMUST00000120323 738 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 BC002163-201ENSMUST00000121906 319 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm24065-201ENSMUST00000157487 264 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm24738-201ENSMUST00000158856 123 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Gm17217-201ENSMUST00000166613 469 ntBASIC6.53□□□□□ -1.36
Msx2Q03358 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms