Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm22256-201ENSMUST00000102291 107 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm23527-201ENSMUST00000104570 130 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm13423-201ENSMUST00000117205 888 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm12135-201ENSMUST00000119170 466 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm6884-201ENSMUST00000119318 615 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm12807-201ENSMUST00000121546 962 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm23467-201ENSMUST00000157127 159 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Mir1945-201ENSMUST00000157919 78 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm24545-201ENSMUST00000158651 85 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm22533-201ENSMUST00000158821 274 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm2976-201ENSMUST00000160362 513 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm23810-201ENSMUST00000175150 74 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm22990-201ENSMUST00000175427 89 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Mir6972-201ENSMUST00000184774 64 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm37380-201ENSMUST00000193752 397 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm43906-201ENSMUST00000203194 906 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm44265-201ENSMUST00000203631 465 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm20136-201ENSMUST00000207501 891 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Scn1bP97952 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.55□□□□□ -1.52
Scn1bP97952 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 AC172027.1-201ENSMUST00000217659 337 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 CT009495.1-201ENSMUST00000224221 862 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm25007-201ENSMUST00000083808 133 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.55□□□□□ -1.52
Scn1bP97952 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Scn1bP97952 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1bP97952 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1bP97952 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1bP97952 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Scn1bP97952 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1bP97952 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
Scn1bP97952 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1bP97952 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Scn1bP97952 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Scn1bP97952 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1bP97952 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Scn1bP97952 Gm11517-201ENSMUST00000119491 387 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm12262-201ENSMUST00000119915 305 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.54□□□□□ -1.52
Scn1bP97952 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.54□□□□□ -1.52
Scn1bP97952 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1bP97952 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm23553-201ENSMUST00000157817 295 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm27005-201ENSMUST00000182783 921 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm29141-201ENSMUST00000190357 882 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm38328-201ENSMUST00000195582 317 ntBASIC5.54□□□□□ -1.52
Scn1bP97952 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms