Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
H3f3aP84244 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
H3f3aP84244 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
H3f3aP84244 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
H3f3aP84244 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm23440-201ENSMUST00000104299 130 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm13770-201ENSMUST00000117149 305 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm8501-201ENSMUST00000117684 432 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.34□□□□□ -1.55
H3f3aP84244 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm25117-201ENSMUST00000157194 144 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm26410-201ENSMUST00000157670 261 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm26595-201ENSMUST00000181585 484 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm18407-201ENSMUST00000192126 790 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.34□□□□□ -1.55
H3f3aP84244 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm43392-201ENSMUST00000196560 434 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm43222-201ENSMUST00000199013 603 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm7181-201ENSMUST00000202197 434 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm5990-201ENSMUST00000203126 746 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm19033-201ENSMUST00000208516 964 ntBASIC5.34□□□□□ -1.55
H3f3aP84244 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.34□□□□□ -1.55
H3f3aP84244 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.34□□□□□ -1.55
H3f3aP84244 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.34□□□□□ -1.55
H3f3aP84244 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3f3aP84244 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
H3f3aP84244 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.34□□□□□ -1.56
H3f3aP84244 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
H3f3aP84244 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.34□□□□□ -1.56
H3f3aP84244 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.33□□□□□ -1.56
H3f3aP84244 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
H3f3aP84244 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.33□□□□□ -1.56
H3f3aP84244 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
H3f3aP84244 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
H3f3aP84244 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
H3f3aP84244 Gm7146-201ENSMUST00000116079 739 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm12077-201ENSMUST00000117049 364 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm7927-201ENSMUST00000118818 880 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm6744-201ENSMUST00000119303 543 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm14842-201ENSMUST00000119577 269 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm12618-201ENSMUST00000121754 483 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm15237-201ENSMUST00000122104 469 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.33□□□□□ -1.56
H3f3aP84244 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
H3f3aP84244 Snora47-201ENSMUST00000157483 138 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm23896-201ENSMUST00000158109 130 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.33□□□□□ -1.56
H3f3aP84244 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
H3f3aP84244 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Gm6074-201ENSMUST00000193340 451 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Gm44316-201ENSMUST00000199274 97 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.33□□□□□ -1.56
H3f3aP84244 Gm19182-201ENSMUST00000207139 577 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.33□□□□□ -1.56
H3f3aP84244 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.33□□□□□ -1.56
H3f3aP84244 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Gm8290-201ENSMUST00000218202 477 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.33□□□□□ -1.56
H3f3aP84244 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
H3f3aP84244 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3f3aP84244 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms