Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.01□□□□□ -1.61
Nkx2-1P50220 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.01□□□□□ -1.61
Nkx2-1P50220 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.01□□□□□ -1.61
Nkx2-1P50220 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.01□□□□□ -1.61
Nkx2-1P50220 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.01□□□□□ -1.61
Nkx2-1P50220 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx2-1P50220 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.01□□□□□ -1.61
Nkx2-1P50220 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm42510-201ENSMUST00000196470 2258 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nkx2-1P50220 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Snord65-201ENSMUST00000104269 72 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm11920-201ENSMUST00000118491 563 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm14098-201ENSMUST00000119295 623 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm13487-201ENSMUST00000122240 864 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5□□□□□ -1.61
Nkx2-1P50220 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm25550-201ENSMUST00000158079 128 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm26355-201ENSMUST00000158220 105 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nkx2-1P50220 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm28023-201ENSMUST00000184556 60 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm27825-201ENSMUST00000184586 60 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm37439-201ENSMUST00000193150 856 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm29736-201ENSMUST00000198189 385 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm44108-201ENSMUST00000203525 422 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm18586-201ENSMUST00000217265 518 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 AC151904.5-201ENSMUST00000218975 549 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5□□□□□ -1.61
Nkx2-1P50220 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm5928-201ENSMUST00000221839 466 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 AC141425.1-201ENSMUST00000224989 265 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm42819-201ENSMUST00000199630 5121 ntBASIC5□□□□□ -1.61
Nkx2-1P50220 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Nkx2-1P50220 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx2-1P50220 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Nkx2-1P50220 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC4.99□□□□□ -1.61
Nkx2-1P50220 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Gm37132-201ENSMUST00000195553 2238 ntBASIC4.99□□□□□ -1.61
Nkx2-1P50220 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Gm43128-201ENSMUST00000202212 1621 ntBASIC4.99□□□□□ -1.61
Nkx2-1P50220 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Nkx2-1P50220 Gm10936-201ENSMUST00000105264 252 ntBASIC4.99□□□□□ -1.61
Nkx2-1P50220 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms