Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
HmgclP38060 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Mir449c-201ENSMUST00000102192 109 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm11893-201ENSMUST00000117829 491 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm13835-201ENSMUST00000118459 685 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm14970-201ENSMUST00000122289 355 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm15300-201ENSMUST00000122324 279 ntBASIC5.89□□□□□ -1.47
HmgclP38060 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Gm9671-201ENSMUST00000171502 547 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm27512-201ENSMUST00000175328 126 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HmgclP38060 Gm15257-201ENSMUST00000177680 883 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm15252-201ENSMUST00000177750 883 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm15256-201ENSMUST00000177793 883 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm4845-201ENSMUST00000179202 562 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm15260-201ENSMUST00000179402 883 ntBASIC5.89□□□□□ -1.47
HmgclP38060 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HmgclP38060 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm37196-201ENSMUST00000194762 906 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 Gm43467-201ENSMUST00000197441 437 ntBASIC5.89□□□□□ -1.47
HmgclP38060 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm4083-201ENSMUST00000207158 451 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Gm19033-201ENSMUST00000208516 964 ntBASIC5.89□□□□□ -1.47
HmgclP38060 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 AV026068-216ENSMUST00000223874 328 ntBASIC5.89□□□□□ -1.47
HmgclP38060 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.89□□□□□ -1.47
HmgclP38060 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
HmgclP38060 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.89□□□□□ -1.47
HmgclP38060 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HmgclP38060 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HmgclP38060 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HmgclP38060 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HmgclP38060 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HmgclP38060 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HmgclP38060 Gm22371-201ENSMUST00000104588 130 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm7146-201ENSMUST00000116079 739 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm12077-201ENSMUST00000117049 364 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm13531-201ENSMUST00000121893 543 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm24741-201ENSMUST00000158857 106 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm24179-201ENSMUST00000158925 127 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm16102-201ENSMUST00000160955 420 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm17366-201ENSMUST00000167629 187 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.88□□□□□ -1.47
HmgclP38060 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm21399-201ENSMUST00000180210 597 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm27193-201ENSMUST00000184217 586 ntBASIC5.88□□□□□ -1.47
HmgclP38060 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HmgclP38060 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm44494-201ENSMUST00000196760 129 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm45156-201ENSMUST00000207255 439 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm6702-201ENSMUST00000208496 471 ntBASIC5.88□□□□□ -1.47
HmgclP38060 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.88□□□□□ -1.47
HmgclP38060 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.88□□□□□ -1.47
HmgclP38060 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.88□□□□□ -1.47
HmgclP38060 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HmgclP38060 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms