Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm6074-201ENSMUST00000193340 451 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.5□□□□□ -1.53
Foxa1P35582 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Gm44316-201ENSMUST00000199274 97 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Gm5990-201ENSMUST00000203126 746 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxa1P35582 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.5□□□□□ -1.53
Foxa1P35582 Gm8290-201ENSMUST00000218202 477 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Gm18592-201ENSMUST00000221529 276 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.5□□□□□ -1.53
Foxa1P35582 Gm36262-201ENSMUST00000223274 499 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Cma2-202ENSMUST00000228263 857 ntBASIC5.5□□□□□ -1.53
Foxa1P35582 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Foxa1P35582 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Foxa1P35582 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxa1P35582 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxa1P35582 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Foxa1P35582 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.5□□□□□ -1.53
Foxa1P35582 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Foxa1P35582 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm24709-201ENSMUST00000104123 132 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm25917-201ENSMUST00000104267 130 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm6744-201ENSMUST00000119303 543 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm7700-201ENSMUST00000120273 970 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm11990-201ENSMUST00000121505 897 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm24741-201ENSMUST00000158857 106 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Mir7082-201ENSMUST00000183526 92 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Mir6361-201ENSMUST00000185079 101 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm412-201ENSMUST00000193360 948 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm37341-201ENSMUST00000194680 371 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm44494-201ENSMUST00000196760 129 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxa1P35582 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.49□□□□□ -1.53
Foxa1P35582 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxa1P35582 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Foxa1P35582 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Foxa1P35582 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Foxa1P35582 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.49□□□□□ -1.53
Foxa1P35582 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Foxa1P35582 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Foxa1P35582 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.48□□□□□ -1.53
Foxa1P35582 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Foxa1P35582 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Foxa1P35582 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Foxa1P35582 Mir700-201ENSMUST00000102169 79 ntBASIC5.48□□□□□ -1.53
Foxa1P35582 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Foxa1P35582 Gm15187-201ENSMUST00000122329 264 ntBASIC5.48□□□□□ -1.53
Foxa1P35582 Gm6081-201ENSMUST00000134472 489 ntBASIC5.48□□□□□ -1.53
Foxa1P35582 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Foxa1P35582 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.48□□□□□ -1.53
Foxa1P35582 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.48□□□□□ -1.53
Foxa1P35582 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.48□□□□□ -1.53
Foxa1P35582 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Foxa1P35582 Gm28066-201ENSMUST00000188657 472 ntBASIC5.48□□□□□ -1.53
Foxa1P35582 Gm18444-201ENSMUST00000191239 629 ntBASIC5.48□□□□□ -1.53
Foxa1P35582 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Foxa1P35582 Gm43222-201ENSMUST00000199013 603 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms