Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12540-201ENSMUST00000121938 319 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC5□□□□□ -1.61
Cdx1P18111 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm14747-201ENSMUST00000149888 984 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm24286-201ENSMUST00000157632 128 ntBASIC5□□□□□ -1.61
Cdx1P18111 Mir1953-201ENSMUST00000157866 89 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm4152-201ENSMUST00000172675 259 ntBASIC5□□□□□ -1.61
Cdx1P18111 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdx1P18111 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm9658-201ENSMUST00000182757 1012 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm26993-201ENSMUST00000182766 789 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5□□□□□ -1.61
Cdx1P18111 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm29141-201ENSMUST00000190357 882 ntBASIC5□□□□□ -1.61
Cdx1P18111 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm2142-201ENSMUST00000197899 589 ntBASIC5□□□□□ -1.61
Cdx1P18111 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5□□□□□ -1.61
Cdx1P18111 Gm18012-201ENSMUST00000204558 773 ntBASIC5□□□□□ -1.61
Cdx1P18111 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm45626-201ENSMUST00000210093 361 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC5□□□□□ -1.61
Cdx1P18111 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 AC153505.2-201ENSMUST00000217741 277 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 AC126554.4-201ENSMUST00000221055 409 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm4012-201ENSMUST00000221504 581 ntBASIC5□□□□□ -1.61
Cdx1P18111 AC153794.2-201ENSMUST00000222650 550 ntBASIC5□□□□□ -1.61
Cdx1P18111 AC117769.2-201ENSMUST00000224612 469 ntBASIC5□□□□□ -1.61
Cdx1P18111 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5□□□□□ -1.61
Cdx1P18111 AV026068-237ENSMUST00000226075 572 ntBASIC5□□□□□ -1.61
Cdx1P18111 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC5□□□□□ -1.61
Cdx1P18111 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdx1P18111 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5□□□□□ -1.61
Cdx1P18111 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5□□□□□ -1.61
Cdx1P18111 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5□□□□□ -1.61
Cdx1P18111 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 Gm45426-201ENSMUST00000209393 3672 ntBASIC5□□□□□ -1.61
Cdx1P18111 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm44043-201ENSMUST00000203426 3253 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx1P18111 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Cdx1P18111 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Cdx1P18111 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm44735-201ENSMUST00000206197 1752 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx1P18111 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx1P18111 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Mir760-201ENSMUST00000103257 119 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 M6pr-ps-201ENSMUST00000120481 830 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Gm14070-201ENSMUST00000120773 428 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Gm6451-201ENSMUST00000121488 717 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Gm15696-201ENSMUST00000121730 445 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Gm11581-201ENSMUST00000122024 763 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx1P18111 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx1P18111 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
Cdx1P18111 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm5871-201ENSMUST00000176461 718 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Gm21614-201ENSMUST00000183260 1005 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm29489-201ENSMUST00000188934 324 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 Gm29592-201ENSMUST00000189434 370 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx1P18111 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdx1P18111 AC135086.1-201ENSMUST00000228621 817 ntBASIC4.99□□□□□ -1.61
Cdx1P18111 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdx1P18111 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms