Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Hoxc9P09633 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Hoxc9P09633 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Hoxc9P09633 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
Hoxc9P09633 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Hoxc9P09633 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Ear-ps2-201ENSMUST00000100689 466 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm14679-201ENSMUST00000121536 722 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm27355-201ENSMUST00000185045 128 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm28064-201ENSMUST00000185639 858 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm43743-202ENSMUST00000198353 491 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm20786-201ENSMUST00000212649 436 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 AC153936.1-201ENSMUST00000219874 395 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
Hoxc9P09633 AC123665.6-201ENSMUST00000228568 538 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm17165-201ENSMUST00000096155 493 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm44043-201ENSMUST00000203426 3253 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hoxc9P09633 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.71□□□□□ -1.18
Hoxc9P09633 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Hoxc9P09633 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hoxc9P09633 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hoxc9P09633 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm14382-201ENSMUST00000117374 437 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm13338-201ENSMUST00000120235 361 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm22895-201ENSMUST00000157508 308 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm23774-201ENSMUST00000158990 131 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm8185-201ENSMUST00000160999 669 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm22420-201ENSMUST00000178795 126 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm28017-201ENSMUST00000183434 126 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm37444-201ENSMUST00000193605 439 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Gm4374-201ENSMUST00000204929 424 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Hoxc9P09633 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Hoxc9P09633 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Hoxc9P09633 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.7□□□□□ -1.18
Hoxc9P09633 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hoxc9P09633 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hoxc9P09633 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Hoxc9P09633 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hoxc9P09633 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Hoxc9P09633 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC7.69□□□□□ -1.18
Hoxc9P09633 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Hoxc9P09633 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Hoxc9P09633 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Scarna6-201ENSMUST00000158656 265 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Gm9006-201ENSMUST00000165520 841 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Hoxc9P09633 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Gm29201-201ENSMUST00000189120 431 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Gm28507-201ENSMUST00000189737 703 ntBASIC7.69□□□□□ -1.18
Hoxc9P09633 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.69□□□□□ -1.18
Hoxc9P09633 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Hoxc9P09633 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc9P09633 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms