Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm18350-201ENSMUST00000187395 955 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm29263-201ENSMUST00000188718 463 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm29573-201ENSMUST00000190291 919 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm18181-201ENSMUST00000190670 736 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm43493-201ENSMUST00000199837 202 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm7946-201ENSMUST00000203326 958 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm5305-201ENSMUST00000204010 746 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm6230-201ENSMUST00000208077 780 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 AC112274.2-201ENSMUST00000218436 170 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 AV026068-218ENSMUST00000223980 575 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 AC150560.3-201ENSMUST00000227442 455 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm23104-201ENSMUST00000083722 104 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm7091-201ENSMUST00000116438 586 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm7129-201ENSMUST00000117402 997 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm13414-201ENSMUST00000117516 727 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm11845-201ENSMUST00000117886 327 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm8534-201ENSMUST00000118553 766 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm14631-201ENSMUST00000119067 594 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm13484-201ENSMUST00000120738 412 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm22794-201ENSMUST00000157228 306 ntBASIC6.1□□□□□ -1.43
Pcdh1F7BJK1 Gm25981-201ENSMUST00000157921 295 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms