Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm25058-201ENSMUST00000157365 128 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm6155-201ENSMUST00000173735 341 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm45739-201ENSMUST00000213094 388 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm11874-201ENSMUST00000117437 130 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm14628-201ENSMUST00000117508 635 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm6071-201ENSMUST00000119561 440 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm22552-201ENSMUST00000157796 337 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm26085-201ENSMUST00000157900 116 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm8256-201ENSMUST00000169178 453 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm37088-201ENSMUST00000193887 406 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm18781-201ENSMUST00000211252 924 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm7780-201ENSMUST00000214787 406 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm43684-201ENSMUST00000199279 6573 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm15297-201ENSMUST00000117795 290 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm13604-201ENSMUST00000119332 482 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm11931-201ENSMUST00000121630 447 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm27551-201ENSMUST00000184258 77 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm37878-201ENSMUST00000192108 387 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a3E9PWQ3 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm43728-201ENSMUST00000198817 2622 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm20773-201ENSMUST00000178940 681 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a3E9PWQ3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 154.7 ms