Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm16073-201ENSMUST00000116032 517 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm14755-201ENSMUST00000118037 384 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm12937-201ENSMUST00000118333 448 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm11976-201ENSMUST00000119236 295 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm14623-201ENSMUST00000121398 603 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm25295-201ENSMUST00000122794 306 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm25675-201ENSMUST00000174979 118 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm22111-201ENSMUST00000178010 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm23687-201ENSMUST00000178664 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm24566-201ENSMUST00000179286 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm23305-201ENSMUST00000179342 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm26389-201ENSMUST00000179819 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm22130-201ENSMUST00000179979 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm22393-201ENSMUST00000180153 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm25085-201ENSMUST00000180298 79 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm29534-201ENSMUST00000187328 382 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm37103-201ENSMUST00000191830 115 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm7452-201ENSMUST00000200764 788 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm6436-201ENSMUST00000077163 451 ntBASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx56Q9D0R4 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm25317-201ENSMUST00000116824 129 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm15531-201ENSMUST00000118062 252 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm14631-201ENSMUST00000119067 594 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm12788-201ENSMUST00000119090 308 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm12041-201ENSMUST00000121606 602 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm3140-201ENSMUST00000163523 481 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm18547-201ENSMUST00000192439 811 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx56Q9D0R4 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 347.7 ms