Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Gm42551-201ENSMUST00000197701 1573 ntBASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Otud1Q9CUB6 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm23701-201ENSMUST00000103893 110 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm22470-201ENSMUST00000104117 130 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm15665-201ENSMUST00000119116 847 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm12402-201ENSMUST00000120536 334 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm13808-201ENSMUST00000121353 184 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm16276-201ENSMUST00000131218 262 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm10157-201ENSMUST00000139408 343 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm23007-201ENSMUST00000158951 177 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm24824-201ENSMUST00000175097 78 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm23269-201ENSMUST00000178701 107 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm5445-201ENSMUST00000180224 480 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm26528-201ENSMUST00000181965 283 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm43850-201ENSMUST00000202021 578 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm45689-201ENSMUST00000210522 133 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm45900-201ENSMUST00000211879 409 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 AC144783.1-201ENSMUST00000219103 960 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm9118-201ENSMUST00000219246 754 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm32899-201ENSMUST00000219694 207 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 AC142245.1-201ENSMUST00000226611 1505 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Otud1Q9CUB6 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.1□□□□□ -1.27
Otud1Q9CUB6 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.09□□□□□ -1.27
Otud1Q9CUB6 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Otud1Q9CUB6 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.09□□□□□ -1.27
Otud1Q9CUB6 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Otud1Q9CUB6 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Otud1Q9CUB6 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Otud1Q9CUB6 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Otud1Q9CUB6 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms