Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Smc1aQ9CU62 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.84□□□□□ -1.32
Smc1aQ9CU62 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Smc1aQ9CU62 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm13455-201ENSMUST00000118767 517 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm14900-201ENSMUST00000120304 733 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm15732-201ENSMUST00000079794 480 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Smc1aQ9CU62 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm12874-201ENSMUST00000117190 913 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm13604-201ENSMUST00000119332 482 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm9428-201ENSMUST00000127214 769 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm25057-201ENSMUST00000157366 88 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm26037-201ENSMUST00000158150 311 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm24733-201ENSMUST00000158863 253 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Mir7220-201ENSMUST00000183978 60 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm9517-201ENSMUST00000195021 874 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm44239-201ENSMUST00000204228 271 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm7780-201ENSMUST00000214787 406 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Smc1aQ9CU62 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms