Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gpr87-201ENSMUST00000056898 1080 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Mir3068-201ENSMUST00000083004 136 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm29486-201ENSMUST00000088648 372 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm22952-201ENSMUST00000116720 120 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm14294-201ENSMUST00000119749 751 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm14065-201ENSMUST00000120848 585 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Snora47-201ENSMUST00000157483 138 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm25904-201ENSMUST00000158491 143 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm5430-201ENSMUST00000182525 915 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm7804-202ENSMUST00000194187 854 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm37358-201ENSMUST00000195492 479 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm3544-201ENSMUST00000196129 305 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm8479-201ENSMUST00000203825 718 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gm23624-201ENSMUST00000082463 321 ntBASIC5.65□□□□□ -1.5
Use1Q9CQ56 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Use1Q9CQ56 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Use1Q9CQ56 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Use1Q9CQ56 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Use1Q9CQ56 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.65□□□□□ -1.51
Use1Q9CQ56 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Use1Q9CQ56 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Use1Q9CQ56 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.65□□□□□ -1.51
Use1Q9CQ56 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm14756-201ENSMUST00000116395 240 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm7746-201ENSMUST00000120966 503 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm24081-201ENSMUST00000175177 125 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm22701-201ENSMUST00000175371 291 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm45448-201ENSMUST00000211739 209 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Use1Q9CQ56 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.64□□□□□ -1.51
Use1Q9CQ56 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.64□□□□□ -1.51
Use1Q9CQ56 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms