Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rtn4Q99P72 Ctse-202ENSMUST00000112411 1837 ntTSL 5 BASIC10.55□□□□□ -0.72
Rtn4Q99P72 Gm42679-201ENSMUST00000197086 2906 ntBASIC10.55□□□□□ -0.72
Rtn4Q99P72 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rtn4Q99P72 Gm11855-201ENSMUST00000121562 1869 ntBASIC10.55□□□□□ -0.72
Rtn4Q99P72 CT009604.1-201ENSMUST00000223900 1328 ntBASIC10.55□□□□□ -0.72
Rtn4Q99P72 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rtn4Q99P72 Gm37372-201ENSMUST00000193577 3311 ntBASIC10.55□□□□□ -0.72
Rtn4Q99P72 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm37096-201ENSMUST00000192317 2058 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm37022-201ENSMUST00000192517 2254 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm23358-201ENSMUST00000103887 110 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm11220-201ENSMUST00000118844 475 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm13475-201ENSMUST00000119290 234 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm14967-201ENSMUST00000153483 335 ntTSL 5 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm26048-201ENSMUST00000157305 142 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm22563-201ENSMUST00000157333 269 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm23332-201ENSMUST00000157424 275 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Ear-ps3-201ENSMUST00000168308 445 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Mir6238-201ENSMUST00000184140 129 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm29041-201ENSMUST00000189199 380 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm6394-201ENSMUST00000197077 477 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm45814-201ENSMUST00000212646 775 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm32220-201ENSMUST00000218420 298 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 AC131795.1-201ENSMUST00000219632 426 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 AC122858.1-202ENSMUST00000228290 986 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 AC124715.1-201ENSMUST00000228480 754 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 H2-M10.6-201ENSMUST00000041398 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm5582-201ENSMUST00000075251 522 ntBASIC10.54□□□□□ -0.72
Rtn4Q99P72 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rtn4Q99P72 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Nmnat1-202ENSMUST00000105693 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Ctnna1-201ENSMUST00000042345 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Hnrnpk-224ENSMUST00000224182 2754 ntBASIC10.53□□□□□ -0.72
Rtn4Q99P72 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm12883-201ENSMUST00000117867 364 ntBASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm11784-201ENSMUST00000118568 474 ntBASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm12034-201ENSMUST00000119032 399 ntBASIC10.53□□□□□ -0.72
Rtn4Q99P72 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm2020-201ENSMUST00000145242 579 ntBASIC10.53□□□□□ -0.72
Rtn4Q99P72 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm3854-201ENSMUST00000207173 2950 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC10.53□□□□□ -0.72
Rtn4Q99P72 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms