Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm9788-201ENSMUST00000057038 906 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Nkx6-1Q99MA9 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Nkx6-1Q99MA9 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Nkx6-1Q99MA9 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Nkx6-1Q99MA9 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Nkx6-1Q99MA9 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm8734-201ENSMUST00000211669 1312 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm42576-201ENSMUST00000202336 2846 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Mir697-201ENSMUST00000102316 109 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm7189-201ENSMUST00000119811 429 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm16139-201ENSMUST00000160015 420 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm17223-201ENSMUST00000171413 481 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm5946-201ENSMUST00000182340 970 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm27861-201ENSMUST00000183920 214 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm27601-201ENSMUST00000184794 127 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm29460-201ENSMUST00000188607 714 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm21803-201ENSMUST00000188897 693 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm28952-201ENSMUST00000189285 681 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm8241-201ENSMUST00000189286 816 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm28567-201ENSMUST00000190270 693 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm19224-201ENSMUST00000190477 793 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm28927-201ENSMUST00000191528 272 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm38237-201ENSMUST00000193366 376 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm37044-201ENSMUST00000193531 693 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm38369-201ENSMUST00000195101 693 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm19104-201ENSMUST00000198392 679 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Igkv13-82-201ENSMUST00000200308 346 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm44075-201ENSMUST00000204208 216 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm6575-201ENSMUST00000222946 697 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms