Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm17222-201ENSMUST00000180135 847 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm37073-201ENSMUST00000192469 1222 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm37072-201ENSMUST00000194570 837 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm37845-201ENSMUST00000194977 355 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm44374-201ENSMUST00000199821 140 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm43233-201ENSMUST00000200491 616 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm7832-201ENSMUST00000202613 880 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm5418-201ENSMUST00000206932 528 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm18405-201ENSMUST00000220743 511 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm9292-201ENSMUST00000222008 710 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm11462-201ENSMUST00000117749 562 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm14833-201ENSMUST00000118345 1027 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm13998-201ENSMUST00000120952 335 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm14957-201ENSMUST00000121069 817 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm12518-201ENSMUST00000122075 779 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm6140-201ENSMUST00000192494 966 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm43772-201ENSMUST00000202052 379 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm5886-202ENSMUST00000203957 522 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm7588-201ENSMUST00000216866 571 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm3266-201ENSMUST00000217832 591 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 AC131068.3-201ENSMUST00000228438 1456 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim9Q8C7M3 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim9Q8C7M3 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Trim9Q8C7M3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC6.69□□□□□ -1.34
Trim9Q8C7M3 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 148.5 ms