Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp2bQ8BJF9 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm26162-201ENSMUST00000157793 132 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Mir7005-201ENSMUST00000185089 69 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Trbv27-201ENSMUST00000193711 277 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm37774-201ENSMUST00000194401 245 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm44108-201ENSMUST00000203525 422 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm11360-201ENSMUST00000221898 262 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Chmp2bQ8BJF9 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm26340-201ENSMUST00000102365 99 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm23768-201ENSMUST00000104440 131 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm25346-201ENSMUST00000104509 128 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm22714-201ENSMUST00000116894 78 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm13679-201ENSMUST00000118678 484 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm14331-201ENSMUST00000120396 409 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm13593-201ENSMUST00000121329 692 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm2986-201ENSMUST00000121603 382 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Snora47-201ENSMUST00000157483 138 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm27782-201ENSMUST00000185059 199 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm4322-201ENSMUST00000191094 336 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm45448-201ENSMUST00000211739 209 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Mir412-201ENSMUST00000083636 80 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Chmp2bQ8BJF9 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Chmp2bQ8BJF9 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms