Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mir5107-201ENSMUST00000175586 88 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm37774-201ENSMUST00000194401 245 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm6850-201ENSMUST00000210031 530 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim43aQ3TL54 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm12439-201ENSMUST00000117162 365 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm7058-201ENSMUST00000119209 902 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm12101-201ENSMUST00000121590 390 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm16269-201ENSMUST00000160532 409 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Mir6989-201ENSMUST00000184812 65 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm18700-201ENSMUST00000185791 553 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm19088-201ENSMUST00000198800 566 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm6702-201ENSMUST00000208496 471 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm11360-201ENSMUST00000221898 262 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim43aQ3TL54 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm16007-201ENSMUST00000117837 286 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm13991-201ENSMUST00000120190 648 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm13493-201ENSMUST00000120318 493 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm27804-201ENSMUST00000185135 119 ntBASIC6.35□□□□□ -1.39
Trim43aQ3TL54 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim43aQ3TL54 Gm412-201ENSMUST00000193360 948 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms