Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PrkdcP97313 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PrkdcP97313 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.77
PrkdcP97313 Gm38224-201ENSMUST00000191648 2100 ntBASIC3.96□□□□□ -1.77
PrkdcP97313 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC3.96□□□□□ -1.78
PrkdcP97313 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm14485-201ENSMUST00000119489 493 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm11622-201ENSMUST00000120525 691 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm23023-201ENSMUST00000158767 109 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm27387-201ENSMUST00000184583 116 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm37882-201ENSMUST00000195254 196 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm37114-201ENSMUST00000195065 1804 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
PrkdcP97313 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Peg13-201ENSMUST00000202826 4725 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PrkdcP97313 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PrkdcP97313 Trio-210ENSMUST00000227337 6375 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm11318-201ENSMUST00000118640 961 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm4852-201ENSMUST00000121202 729 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm12807-201ENSMUST00000121546 962 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm16589-201ENSMUST00000159522 918 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm7496-201ENSMUST00000192573 1034 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 AC121986.1-201ENSMUST00000218588 781 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 AC153548.2-201ENSMUST00000219770 885 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC3.96□□□□□ -1.78
PrkdcP97313 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm23626-201ENSMUST00000082458 133 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm44068-201ENSMUST00000204049 2128 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PrkdcP97313 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm23692-201ENSMUST00000101881 160 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PrkdcP97313 Zakit-201ENSMUST00000157677 308 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm15970-201ENSMUST00000160623 834 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm8221-201ENSMUST00000178052 564 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm27541-201ENSMUST00000184078 122 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Mir7047-201ENSMUST00000184595 64 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm19029-201ENSMUST00000189923 564 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm37215-201ENSMUST00000194927 1259 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm10115-201ENSMUST00000076071 1228 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm37945-201ENSMUST00000192536 4367 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PrkdcP97313 Gm38325-201ENSMUST00000194507 1377 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PrkdcP97313 CT025686.2-201ENSMUST00000227898 3315 ntBASIC3.96□□□□□ -1.78
PrkdcP97313 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm42513-201ENSMUST00000197831 2119 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PrkdcP97313 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.95□□□□□ -1.78
PrkdcP97313 Gm14755-201ENSMUST00000118037 384 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm8291-201ENSMUST00000209635 1261 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 Gm6362-201ENSMUST00000217686 836 ntBASIC3.95□□□□□ -1.78
PrkdcP97313 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.95□□□□□ -1.78
PrkdcP97313 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
PrkdcP97313 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PrkdcP97313 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms