Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm24695-201ENSMUST00000083877 83 ntBASIC4.9□□□□□ -1.63
VhlP40338 Gm24029-201ENSMUST00000083928 143 ntBASIC4.9□□□□□ -1.63
VhlP40338 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VhlP40338 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VhlP40338 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.9□□□□□ -1.63
VhlP40338 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VhlP40338 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.9□□□□□ -1.63
VhlP40338 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VhlP40338 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VhlP40338 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VhlP40338 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VhlP40338 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
VhlP40338 Wnk1-218ENSMUST00000161512 1426 ntBASIC4.89□□□□□ -1.63
VhlP40338 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VhlP40338 AC132852.2-201ENSMUST00000216052 2794 ntBASIC4.89□□□□□ -1.63
VhlP40338 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm9521-201ENSMUST00000206656 1516 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm18880-201ENSMUST00000223333 1541 ntBASIC4.89□□□□□ -1.63
VhlP40338 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm26289-201ENSMUST00000104169 131 ntBASIC4.89□□□□□ -1.63
VhlP40338 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
VhlP40338 Gm14331-201ENSMUST00000120396 409 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm12400-201ENSMUST00000120915 1003 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm15502-201ENSMUST00000121449 208 ntBASIC4.89□□□□□ -1.63
VhlP40338 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm14847-201ENSMUST00000121978 519 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC4.89□□□□□ -1.63
VhlP40338 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC4.89□□□□□ -1.63
VhlP40338 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Gm26211-201ENSMUST00000158578 129 ntBASIC4.89□□□□□ -1.63
VhlP40338 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
VhlP40338 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
VhlP40338 Gm24081-201ENSMUST00000175177 125 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC4.89□□□□□ -1.63
VhlP40338 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.89□□□□□ -1.63
VhlP40338 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC4.89□□□□□ -1.63
VhlP40338 Gm19088-201ENSMUST00000198800 566 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm43849-201ENSMUST00000201086 215 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm44053-201ENSMUST00000203364 929 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm18805-201ENSMUST00000206872 655 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC4.89□□□□□ -1.63
VhlP40338 Gm7769-201ENSMUST00000212900 933 ntBASIC4.89□□□□□ -1.63
VhlP40338 AC079644.2-201ENSMUST00000220581 322 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.89□□□□□ -1.63
VhlP40338 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm10205-201ENSMUST00000087431 234 ntBASIC4.89□□□□□ -1.63
VhlP40338 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm9575-201ENSMUST00000122140 1339 ntBASIC4.89□□□□□ -1.63
VhlP40338 Gm8853-201ENSMUST00000198366 1344 ntBASIC4.89□□□□□ -1.63
VhlP40338 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VhlP40338 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC4.89□□□□□ -1.63
VhlP40338 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VhlP40338 Gm43328-201ENSMUST00000198544 1434 ntBASIC4.89□□□□□ -1.63
VhlP40338 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VhlP40338 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VhlP40338 Gm43612-201ENSMUST00000196087 3207 ntBASIC4.88□□□□□ -1.63
VhlP40338 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VhlP40338 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.88□□□□□ -1.63
VhlP40338 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VhlP40338 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
VhlP40338 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VhlP40338 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VhlP40338 Gm7058-201ENSMUST00000119209 902 ntBASIC4.88□□□□□ -1.63
VhlP40338 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VhlP40338 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VhlP40338 Gm12504-202ENSMUST00000148026 306 ntBASIC4.88□□□□□ -1.63
VhlP40338 Gm16260-201ENSMUST00000155141 304 ntBASIC4.88□□□□□ -1.63
VhlP40338 Gm23279-201ENSMUST00000157912 97 ntBASIC4.88□□□□□ -1.63
VhlP40338 Gm24363-201ENSMUST00000158440 311 ntBASIC4.88□□□□□ -1.63
VhlP40338 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC4.88□□□□□ -1.63
VhlP40338 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC4.88□□□□□ -1.63
VhlP40338 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VhlP40338 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms